Index

A

add_resource() (swifco_rs.Model method) add_system() (swifco_rs.Model method)

age_class_map() (in module swifco_rs.observers.population) age_class_table() (in module swifco_rs.observers.population)

B

background_event_hunting() (in module swifco_rs.management)

C

callback() (in module swifco_rs.asf.release) (in module swifco_rs.csf.release) (in module swifco_rs.init_map) (in module swifco_rs.reporters.events) (in module swifco_rs.reporters.grid) (in module swifco_rs.reporters.time_series) (in module swifco_rs.terminate) callback_poisson() (in module swifco_rs.init_map) carcass_removal_zones() (in module swifco_rs.management) carcasses_map() (in module swifco_rs.observers.population) carcasses_table() (in module swifco_rs.observers.population)

CarcassRemovalParams (class in swifco_rs.management) cause_of_death_map() (in module swifco_rs.observers.population) cause_of_death_table() (in module swifco_rs.observers.population) color_cycle() (in module swifco_rs.reporters.grid.rgb_grid) color_map() (in module swifco_rs.analysis) (in module swifco_rs.reporters.grid.rgb_grid) common_direction_and_seasonal_decay() (in module swifco_rs.carcasses) continuous_estimate (swifco_rs.management.HuntingParams attribute) counting() (in module swifco_rs.asf.mutation) csv_writer() (in module swifco_rs.reporters.events) (in module swifco_rs.reporters.time_series)

D

default_ageing() (in module swifco_rs.ageing) default_carcass_removal() (in module swifco_rs.management) default_disease_course() (in module swifco_rs.asf.disease_course) default_female_dispersal() (in module swifco_rs.dispersal) default_fences() (in module swifco_rs.management) default_hunting() (in module swifco_rs.management) default_infection() (in module swifco_rs.asf.infection) (in module swifco_rs.csf.infection)

default_male_dispersal() (in module swifco_rs.dispersal) default_mortality() (in module swifco_rs.mortality) default_population() (in module swifco_rs.init_pop) default_reproduction() (in module swifco_rs.reproduction) detection_duration (swifco_rs.management.CarcassRemovalParams attribute) detection_probability (swifco_rs.management.CarcassRemovalParams attribute) duration (swifco_rs.management.CarcassRemovalParams attribute) (swifco_rs.management.HuntingParams attribute)

E

epi_stat_map() (in module swifco_rs.observers.asf) (in module swifco_rs.observers.csf) epi_stat_table() (in module swifco_rs.observers.asf) (in module swifco_rs.observers.csf)

event_carcass_removal() (in module swifco_rs.management) event_hunting() (in module swifco_rs.management) exponential() (in module swifco_rs.csf.disease_course)

F

female_dispersal_kernel() (in module swifco_rs.observers.dispersal) females_only (swifco_rs.management.HuntingParams attribute) fence_zones() (in module swifco_rs.management) FenceParams (class in swifco_rs.management) first_infection_map() (in module swifco_rs.observers.asf) (in module swifco_rs.observers.csf)

first_new_infection_map() (in module swifco_rs.observers.asf) fixed_decay() (in module swifco_rs.carcasses) fixed_tick() (in module swifco_rs.terminate) float_to_greyscale() (in module swifco_rs.reporters.grid.rgb_grid)

H

high (swifco_rs.management.FenceParams attribute) hunted_list() (in module swifco_rs.observers.management) hunted_map() (in module swifco_rs.observers.management)

hunted_table() (in module swifco_rs.observers.management) hunting_zones() (in module swifco_rs.management) HuntingParams (class in swifco_rs.management)

I

image_viewer() (in module swifco_rs.analysis) infectious_carcasses_list() (in module swifco_rs.observers.asf) infectious_carcasses_sample() (in module swifco_rs.observers.asf)

int_array_to_rgb() (in module swifco_rs.reporters.grid.rgb_grid) int_to_greyscale() (in module swifco_rs.reporters.grid.rgb_grid) interval (swifco_rs.management.CarcassRemovalParams attribute) (swifco_rs.management.HuntingParams attribute)

L

low (swifco_rs.management.FenceParams attribute)

M

male_dispersal_kernel() (in module swifco_rs.observers.dispersal) Model (class in swifco_rs) module swifco_rs swifco_rs.ageing swifco_rs.analysis swifco_rs.asf swifco_rs.asf.disease_course swifco_rs.asf.infection swifco_rs.asf.mutation swifco_rs.asf.release swifco_rs.callback swifco_rs.carcasses swifco_rs.csf swifco_rs.csf.disease_course swifco_rs.csf.infection swifco_rs.csf.release swifco_rs.dispersal swifco_rs.init_map swifco_rs.init_pop swifco_rs.inputs swifco_rs.management swifco_rs.mortality swifco_rs.observers swifco_rs.observers.asf swifco_rs.observers.csf swifco_rs.observers.dispersal swifco_rs.observers.management swifco_rs.observers.map swifco_rs.observers.population swifco_rs.reporters swifco_rs.reporters.events swifco_rs.reporters.grid swifco_rs.reporters.grid.rgb_grid swifco_rs.reporters.time_series swifco_rs.reproduction swifco_rs.terminate swifco_rs.utils

movable_fences() (in module swifco_rs.management)

N

new_infections_map() (in module swifco_rs.observers.asf)

new_infections_table() (in module swifco_rs.observers.asf) next_color() (in module swifco_rs.analysis)

P

permeability (swifco_rs.management.FenceParams attribute) permeability_map() (in module swifco_rs.observers.map)

population_map() (in module swifco_rs.observers.population) population_table() (in module swifco_rs.observers.population)

R

random() (in module swifco_rs.asf.release) (in module swifco_rs.csf.release) random_uniform() (in module swifco_rs.init_map) reactive_carcass_removal_zone() (in module swifco_rs.management) reactive_fence_zone() (in module swifco_rs.management) reactive_hunting_zone() (in module swifco_rs.management) removed_carcasses_list() (in module swifco_rs.observers.management)

removed_carcasses_map() (in module swifco_rs.observers.management) removed_carcasses_table() (in module swifco_rs.observers.management) renderer() (in module swifco_rs.reporters.grid.rgb_grid) repetitions (swifco_rs.management.CarcassRemovalParams attribute) (swifco_rs.management.HuntingParams attribute) run() (swifco_rs.Model method) run_parallel() (in module swifco_rs.utils)

S

seasonal_decay() (in module swifco_rs.carcasses) secondary_infections() (in module swifco_rs.observers.asf) set_map_init() (swifco_rs.Model method) set_pop_init() (swifco_rs.Model method) spread_movement_list() (in module swifco_rs.observers.asf) spread_velocity_map() (in module swifco_rs.observers.asf) start (swifco_rs.management.CarcassRemovalParams attribute) (swifco_rs.management.HuntingParams attribute) step() (in module swifco_rs.callback) store_infection_location() (in module swifco_rs.asf.infection) swifco_rs module swifco_rs.ageing module swifco_rs.analysis module swifco_rs.asf module swifco_rs.asf.disease_course module swifco_rs.asf.infection module swifco_rs.asf.mutation module swifco_rs.asf.release module swifco_rs.callback module swifco_rs.carcasses module swifco_rs.csf module swifco_rs.csf.disease_course module swifco_rs.csf.infection module swifco_rs.csf.release module swifco_rs.dispersal module

swifco_rs.init_map module swifco_rs.init_pop module swifco_rs.inputs module swifco_rs.management module swifco_rs.mortality module swifco_rs.observers module swifco_rs.observers.asf module swifco_rs.observers.csf module swifco_rs.observers.dispersal module swifco_rs.observers.management module swifco_rs.observers.map module swifco_rs.observers.population module swifco_rs.reporters module swifco_rs.reporters.events module swifco_rs.reporters.grid module swifco_rs.reporters.grid.rgb_grid module swifco_rs.reporters.time_series module swifco_rs.reproduction module swifco_rs.terminate module swifco_rs.utils module

T

target_density (swifco_rs.management.HuntingParams attribute) target_number (swifco_rs.management.HuntingParams attribute) target_share (swifco_rs.management.HuntingParams attribute)

tif_reader() (in module swifco_rs.inputs) tif_writer() (in module swifco_rs.analysis) time_series_viewer() (in module swifco_rs.analysis)

V

variants_list() (in module swifco_rs.observers.asf) variants_map() (in module swifco_rs.observers.asf) video_blender() (in module swifco_rs.analysis)

video_scaler() (in module swifco_rs.analysis) video_stacker() (in module swifco_rs.analysis) video_writer() (in module swifco_rs.analysis)

W

white_zone() (in module swifco_rs.management)

X

xyt_release() (in module swifco_rs.inputs)

Z

zone_map() (in module swifco_rs.observers.map)